Publications
Publications
- Identifying Spatial Co-occurrence in Healthy and Inflamed tissues (ISCHIA)
- Multimodal decoding of human liver regeneration
- Traumatic brain injury modifies adult hippocampal neural stem cell fate to promote neurogenesis at the cost of astrogliogenesis
- A spatially resolved single cell genomic atlas of the adult human breast
- Multimodal spatiotemporal phenotyping of human retinal organoid development
- A pan-grass transcriptome reveals patterns of cellular divergence in crops
- Unravelling cell type specific response to Parkinson’s Disease at single cell resolution
- A single-cell, time-resolved profiling of Xenopus mucociliary epithelium reveals non-hierarchical model of development
- The cancer-specific lncRNA LISR customizes ribosomes to suppress anti-tumour immunity
- Enhancer grammar of liver cell types and hepatocyte zonation states
- Active eosinophils regulate host defense and immune responses in colitis
- Sphere-sequencing unveils local tissue microenvironments at single cell resolution
- A cellular hierarchy in melanoma uncouples growth and metastasis
- Identification of the central intermediate in the extra-embryonic to embryonic endoderm transition through single-cell transcriptomics
- Single cell transcriptomics shows dose-dependent disruption of hepatic zonation by TCDD in mice
- Compartments in medulloblastoma with extensive nodularity are connected through differentiation along the granular precursor lineage
- SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks
- Spatio-temporal, optogenetic control of gene expression in organoids
- Dynamic control of metabolic zonation and liver repair by endothelial cell Wnt2 and Wnt9b revealed by single cell spatial transcriptomics using Molecular Cartography
- Diversity and function of motile ciliated cell types within ependymal lineages of the zebrafish brain
- Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches
- Highly resolved spatial transcriptomics for detection of rare events in cells
